PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT27386
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 102aa    MW: 11053.9 Da    PI: 9.4918
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT27386genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.21.2e-117697122
              ---SS-EEEEEEE--TT-SS-E CS
      WRKY  1 ldDgynWrKYGqKevkgsefpr 22
              ldDgy+WrKYGqK vk+s +pr
  EMT27386 76 LDDGYRWRKYGQKAVKNSSNPR 97
              59*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.0E-136297IPR003657WRKY domain
SuperFamilySSF1182909.42E-106898IPR003657WRKY domain
PROSITE profilePS5081112.9667197IPR003657WRKY domain
SMARTSM007740.003576101IPR003657WRKY domain
PfamPF031062.1E-77797IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MGDVDWSSLF QTELVAPPEQ KEEAVQADQS GENDGEAGGS GSGNKEKAKG SAGRSGKKKA  60
SKPRFAFHTR SENDILDDGY RWRKYGQKAV KNSSNPRYGS SN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-129HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003567084.11e-41PREDICTED: probable WRKY transcription factor 12
TrEMBLM8CUB72e-69M8CUB7_AEGTA; Putative WRKY transcription factor 56
STRINGMLOC_54950.14e-43(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP110038133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.23e-16WRKY DNA-binding protein 43